\Amelaye\BioPHP\Api\DTOTypeIIEndonucleaseDTO

Enzymes - TypeIIs Endonucleases

Summary

Methods

Properties

Constants

getId()
setId()
getSamePattern()
setSamePattern()
getRecognitionPattern()
setRecognitionPattern()
getComputingPattern()
setComputingPattern()
getLengthRecognitionPattern()
setLengthRecognitionPattern()
getCleavagePosUpper()
setCleavagePosUpper()
getCleavagePosLower()
setCleavagePosLower()
getNbNonNBases()
setNbNonNBases()

No public properties found

No constants found

No protected methods found

No protected properties found

N/A

No private methods found

$id
$samePattern
$recognitionPattern
$computingPattern
$lengthRecognitionPattern
$cleavagePosUpper
$cleavagePosLower
$nbNonNBases

N/A

File: Api/DTO/TypeIIEndonucleaseDTO.php
Package: Api\DTO
Class hierarchy: \Amelaye\BioPHP\Api\DTO\TypeIIEndonucleaseDTO

Properties

$id

$id : string

Type

normal — First endonucleolase of the list

$samePattern

$samePattern : array

Type

normal — All endonucleolases recognizing the same pattern

$recognitionPattern

$recognitionPattern : string

Type

normal — Recognition pattern

$computingPattern

$computingPattern : string

Type

normal — Recognition pattern for computing

$lengthRecognitionPattern

$lengthRecognitionPattern : int

Type

normal — Length of all recognition pattern

$cleavagePosUpper

$cleavagePosUpper : int

Type

normal — Cleavage position in upper strand

$cleavagePosLower

$cleavagePosLower : int

Type

normal — Cleavage position in lower strand, relative to previous one

$nbNonNBases

$nbNonNBases : int

Type

normal — Number of non-N bases within recognition pattern

Methods

getId()

getId() : string

Returns

string

setId()

setId(string  $id) : void

Parameters

string

$id

getSamePattern()

getSamePattern() : array

Returns

array

setSamePattern()

setSamePattern(array  $samePattern) : void

Parameters

array

$samePattern

getRecognitionPattern()

getRecognitionPattern() : string

Returns

string

setRecognitionPattern()

setRecognitionPattern(string  $recognitionPattern) : void

Parameters

string

$recognitionPattern

getComputingPattern()

getComputingPattern() : string

Returns

string

setComputingPattern()

setComputingPattern(string  $computingPattern) : void

Parameters

string

$computingPattern

getLengthRecognitionPattern()

getLengthRecognitionPattern() : int

Returns

int

setLengthRecognitionPattern()

setLengthRecognitionPattern(int  $lengthRecognitionPattern) : void

Parameters

int

$lengthRecognitionPattern

getCleavagePosUpper()

getCleavagePosUpper() : int

Returns

int

setCleavagePosUpper()

setCleavagePosUpper(int  $cleavagePosUpper) : void

Parameters

int

$cleavagePosUpper

getCleavagePosLower()

getCleavagePosLower() : int

Returns

int

setCleavagePosLower()

setCleavagePosLower(int  $cleavagePosLower) : void

Parameters

int

$cleavagePosLower

getNbNonNBases()

getNbNonNBases() : int

Returns

int

setNbNonNBases()

setNbNonNBases(int  $nbNonNBases) : void

Parameters

int

$nbNonNBases