LinearRestrictionDigestResult
in package
FinalYes
getCuts() lists every recognition site that cuts inside the sequence, including several isoschizomers cutting at the same position ; getFragments() lists the distinct fragments, from the left end of the sequence to its right end, so n distinct cut positions give n + 1 of them.
Class LinearRestrictionDigestResult
Tags
Table of Contents
Properties
- $cuts : array<string|int, RestrictionCut>
- $enzymeNames : array<string|int, string>
- $fragments : array<string|int, RestrictionFragment>
- $sequence : DnaSequence
- $warnings : array<string|int, string>
Methods
- __construct() : mixed
- LinearRestrictionDigestResult constructor.
- getCuts() : array<string|int, RestrictionCut>
- getEnzymeNames() : array<string|int, string>
- getFragments() : array<string|int, RestrictionFragment>
- getSequence() : DnaSequence
- getWarnings() : array<string|int, string>
Properties
$cuts
private
array<string|int, RestrictionCut>
$cuts
$enzymeNames
private
array<string|int, string>
$enzymeNames
$fragments
private
array<string|int, RestrictionFragment>
$fragments
$sequence
private
DnaSequence
$sequence
$warnings
private
array<string|int, string>
$warnings
Methods
__construct()
LinearRestrictionDigestResult constructor.
public
__construct(DnaSequence $oSequence, array<string|int, string> $aEnzymeNames, array<string|int, RestrictionCut> $aCuts, array<string|int, RestrictionFragment> $aFragments[, array<string|int, string> $aWarnings = [] ]) : mixed
Parameters
- $oSequence : DnaSequence
- $aEnzymeNames : array<string|int, string>
- $aCuts : array<string|int, RestrictionCut>
- $aFragments : array<string|int, RestrictionFragment>
- $aWarnings : array<string|int, string> = []
getCuts()
public
getCuts() : array<string|int, RestrictionCut>
Return values
array<string|int, RestrictionCut>getEnzymeNames()
public
getEnzymeNames() : array<string|int, string>
Return values
array<string|int, string>getFragments()
public
getFragments() : array<string|int, RestrictionFragment>
Return values
array<string|int, RestrictionFragment>getSequence()
public
getSequence() : DnaSequence
Return values
DnaSequencegetWarnings()
public
getWarnings() : array<string|int, string>