\Amelaye\BioPHP\Domain\Tools\Interfaces OligosInterface

findOligos2BasesLong()

findOligos2BasesLong(mixed  $oligos_1step) : mixed

For oligos 2 bases long

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findOligos3BasesLong()

findOligos3BasesLong(mixed  $oligos_1step) : mixed

For oligos 3 bases long

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findOligos4BasesLong()

findOligos4BasesLong(mixed  $oligos_1step) : mixed

For oligos 4 bases long

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findOligos5BasesLong()

findOligos5BasesLong(mixed  $oligos_1step) : mixed

For oligos 5 bases long

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findOligos6BasesLong()

findOligos6BasesLong(mixed  $oligos_1step) : mixed

For oligos 6 bases long

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findOligos7BasesLong()

findOligos7BasesLong(mixed  $oligos_1step) : mixed

For oligos 7 bases long

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findOligos8BasesLong()

findOligos8BasesLong(mixed  $oligos_1step) : mixed

For oligos 8 bases long

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findOligos()

findOligos(string  $sSequence, int  $iOligoLen) : array

Compute frequency of oligonucleotides with length $iOligoLen for sequence $sSequence

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Throws

\Exception

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findZScore()

findZScore(mixed  $oligos2, mixed  $oligos3, mixed  $oligos4) : array

COMPUTE Z-SCORES FOR TETRANUCLEOTIDES

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