CountACGT() CountACGT(string $sSequence) : int Will count number of A, C, G and T bases in the sequence Parameters string $sSequence is the sequence Throws \Exception Returns int —
CountYRWSKMDVHB() CountYRWSKMDVHB(string $c) : int Will count number of degenerate nucleotides (Y, R, W, S, K, MD, V, H and B) in the sequence Parameters string $c Throws \Exception Returns int —
CreateInversion() CreateInversion(mixed $sSequence, mixed $dnaComplements) : string Place sequence and reverse complement of sequence in one line Parameters mixed $sSequence mixed $dnaComplements Returns string —
RemoveNonCodingProt() RemoveNonCodingProt(string $sSequence) : string Removes non-coding characters Parameters string $sSequence Throws \Exception Returns string —