SubstitutionScoringInterface.php
Scores one pair of aligned symbols Freely inspired by BioPHP's project biophp.org Created 30 September 2026 Last modified 2 October 2026
Table of Contents
Interfaces
- SubstitutionScoringInterface
- Interface SubstitutionScoringInterface - lets a pairwise aligner stay ignorant of how two symbols are scored against each other, whether by a flat match/mismatch rule or a substitution matrix such as PAM250.