ParseAaindexManager.php
AAINDEX1 database parsing (physico-chemical indices of amino acids) Freely inspired by BioPHP's project biophp.org Created 25 August 2026 Last modified 12 September 2026
Table of Contents
Classes
- ParseAaindexManager
- Class ParseAaindexManager An AAINDEX1 entry describes a numerical property of the twenty amino acids, not a sequence, so this class exposes plain scalars rather than the Sequence/Feature entities of ParseDbAbstractManager. Its data fields are single letter tags whose continuation lines start with a space, the GenBank way. The C (correlated entries) and I (index values) fields are not decomposed : they are fixed numeric tables the original BioPHP parser never touched either.