ParseAaindexManager.php
AAINDEX1 database parsing (physico-chemical indices of amino acids) Freely inspired by BioPHP's project biophp.org Created 25 August 2026 Last modified 8 October 2026
Table of Contents
Classes
- ParseAaindexManager
- Class ParseAaindexManager An AAINDEX1 entry describes a numerical property of the twenty amino acids, not a sequence, so this class exposes plain scalars rather than the Sequence/Feature entities of ParseDbAbstractManager. Its data fields are single letter tags whose continuation lines start with a space, the GenBank way. The C field lists the entries the index correlates with, and the I field the index values themselves, one per amino acid : the original BioPHP parser left both aside, so the data of the entry was never available.