ParseKeggAbstractManager.php
Shared reading of the KEGG flat files Freely inspired by BioPHP's project biophp.org Created 12 September 2026 Last modified 9 October 2026
Table of Contents
Classes
- ParseKeggAbstractManager
- Class ParseKeggAbstractManager KEGG describes metabolism through several files - compound, enzyme, reaction, ortholog, genome - written in one same grammar : a label in the first twelve columns, its data from the thirteenth, a line leaving the label column blank continuing the field above it, and "///" closing the record. That grammar and the ENTRY and NAME fields every record carries live here; each subclass adds the fields of its own file.