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Amelaye
BioPHP
Api
DTO
AminoDTO
ElementDTO
NucleotidDTO
Pam250MatrixDigitDTO
PKDTO
ProteinReductionDTO
TmBaseStackingDTO
TripletDTO
TripletSpecieDTO
TypeIIbEndonucleaseDTO
TypeIIEndonucleaseDTO
TypeIIsEndonucleaseDTO
VendorDTO
VendorLinkDTO
Interfaces
AminoApiAdapter
ElementApiAdapter
NucleotidApiAdapter
Pam250MatrixDigitApiAdapter
PKApiAdapter
ProteinReductionApiAdapter
TmBaseStackingApiAdapter
TripletApiAdapter
TripletSpecieApiAdapter
TypeIIbEndonucleaseApiAdapter
TypeIIEndonucleaseApiAdapter
TypeIIsEndonucleaseApiAdapter
VendorApiAdapter
VendorLinkApiAdapter
AminoApi
Bioapi
ElementApi
NucleotidApi
Pam250MatrixDigitApi
PKApi
ProteinReductionApi
TmBaseStackingApi
TripletApi
TripletSpecieApi
TypeIIbEndonucleaseApi
TypeIIEndonucleaseApi
TypeIIsEndonucleaseApi
VendorApi
VendorLinkApi
DependencyInjection
AmelayeBioPHPExtension
Configuration
Domain
Database
Entity
Collection
CollectionElement
ParsedRecord
Factory
DatabaseParserFactory
DatabaseReaderFactory
DatabaseRecorderFactory
Interfaces
DatabaseInterface
ParseDatabaseInterface
RecordStorageInterface
Service
DatabaseManager
EntryReader
ParseDbAbstractManager
ParsedDataExtractor
RecordManager
Parser
Entity
EntrezReference
ExpasyDisease
GenomeReference
PdbAtom
PdbHelix
PdbSheet
PrositeDbRef
Interfaces
EntrezReferenceInterface
ExpasyDiseaseInterface
GenomeReferenceInterface
PdbAtomInterface
PdbHelixInterface
PdbSheetInterface
PrositeDbRefInterface
Service
ParseAaindexManager
ParseBlocksManager
ParseEmblManager
ParseEntrezManager
ParseEpdManager
ParseExpasyEnzymeManager
ParseGenbankManager
ParseGenomeManager
ParseHgbaseManager
ParseKeggAbstractManager
ParseKeggCompoundManager
ParseKeggEnzymeManager
ParseKeggGenomeManager
ParseKeggOrthologManager
ParseKeggReactionManager
ParseNcbiLitManager
ParsePdbManager
ParsePdbstrManager
ParsePirManager
ParsePmdManager
ParsePrfManager
ParsePrintsManager
ParseProdomManager
ParsePrositeManager
ParseSwissprotManager
ParseTransfacAbstractManager
ParseTransfacCellManager
ParseTransfacClassManager
ParseTransfacFactorManager
ParseTransfacGeneManager
ParseTransfacMatrixManager
ParseTransfacSiteManager
ParseUnigeneManager
Sequence
Builder
SequenceBuilder
Entity
Accession
Author
Enzyme
Feature
GbSequence
Keyword
Protein
Reference
Sequence
SpDatabank
SrcForm
SubMatrix
Interfaces
ProteinInterface
RestrictionEnzymeInterface
SequenceAlignmentInterface
SequenceInterface
SequenceMatchInterface
Service
ProteinManager
RestrictionEnzymeManager
SequenceAlignmentManager
SequenceManager
SequenceMatchManager
Traits
FormatsTrait
SequenceTrait
ValueObject
AbstractMolecularSequence
AbstractNucleicSequence
AminoAcidSequence
DnaSequence
InvalidSequenceException
MolecularSequenceFactory
RnaSequence
Tools
Interfaces
OligosInterface
Service
GeneticsFunctions
MathematicsFunctions
OligosManager
Domain/Sequence/Interfaces
ProteinInterface.php
Protein Interface
Interfaces
ProteinInterface
Defines protein-specific sequence operations.
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