CodonOptimizerInterface.php
Codon optimization Interface Freely inspired by BioPHP's project biophp.org Created 30 September 2026 Last modified 2 October 2026
Table of Contents
Interfaces
- CodonOptimizerInterface
- Interface CodonOptimizerInterface - the inverse of CodonAdaptationIndexCalculator : rather than scoring an existing coding sequence against a reference codon usage table, this picks, for each residue of a target protein, the synonymous codon with the highest count in that table - the coding sequence a perfect (CAI = 1) translation of the protein would have.