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Table of Contents

Domain/Sequence/Interfaces/RestrictionEnzymeInterface.php	1
Domain/Sequence/Interfaces/SequenceAlignmentInterface.php	1
Domain/Sequence/Service/SequenceAlignmentManager.php	6

RestrictionEnzymeInterface.php

Type	Line	Description
TODO	52	: penser à faire une factory

SequenceAlignmentInterface.php

Type	Line	Description
TODO	23	: length doit représenter la totalité des séquences

SequenceAlignmentManager.php

Type	Line	Description
TODO	368	Sequence::getSeqLength() can now return null (nullable typing). No guard is applied here yet: a business decision is pending (throw an explicit exception when the value is missing, vs treat the absence as a valid business case).
TODO	413	Sequence::getStart()/getEnd()/getSeqLength() can now return null (nullable typing). No guard is applied here yet: a business decision is pending (throw an explicit exception when the value is missing, vs treat the absence as a valid business case).
TODO	462	Sequence::getSeqLength()/getStart() can now return null (nullable typing). No guard is applied here yet: a business decision is pending (throw an explicit exception when the value is missing, vs treat the absence as a valid business case).
TODO	635	Sequence::getSeqLength() can now return null (nullable typing). No guard is applied here yet: a business decision is pending (throw an explicit exception when the value is missing, vs treat the absence as a valid business case).
TODO	675	Sequence::getSeqLength() can now return null (nullable typing). No guard is applied here yet: a business decision is pending (throw an explicit exception when the value is missing, vs treat the absence as a valid business case).
TODO	748	Sequence::getStart()/getEnd()/getSeqLength() can now return null (nullable typing). No guard is applied here yet: a business decision is pending (throw an explicit exception when the value is missing, vs treat the absence as a valid business case).