$accession
$accession : array
Class ParseGenbankManager
$sequence : \App\Domain\Sequence\Entity\Sequence
$srcForm : \App\Domain\Sequence\Entity\SrcForm
$gbSequence : \App\Domain\Sequence\Entity\GbSequence
getSequence() : \App\Domain\Sequence\Entity\Sequence
getGbSequence() : \App\Domain\Sequence\Entity\GbSequence
getSrcForm() : \App\Domain\Sequence\Entity\SrcForm
setSequence(\App\Domain\Sequence\Entity\Sequence $sequence)
\App\Domain\Sequence\Entity\Sequence | $sequence |
setSrcForm(\App\Domain\Sequence\Entity\SrcForm $srcForm)
\App\Domain\Sequence\Entity\SrcForm | $srcForm |
setGbSequence(\App\Domain\Sequence\Entity\GbSequence $gbSequence)
\App\Domain\Sequence\Entity\GbSequence | $gbSequence |
parseDataFile(array $aFlines) : \App\Domain\Sequence\Entity\Sequence
Parses a GenBank data file and returns a Seq object containing parsed data.
array | $aFlines | The lines the script has to parse |
$oSequence