CountACGT() CountACGT(string $sSequence) : integer Will count number of A, C, G and T bases in the sequence Parameters string $sSequence is the sequence Throws \Exception Returns integer
countYRWSKMDVHB() countYRWSKMDVHB(string $c) : integer Will count number of degenerate nucleotides (Y, R, W, S, K, MD, V, H and B) in the sequence Parameters string $c Throws \Exception Returns integer
createInversion() createInversion( $sSequence, $dnaComplements) Place sequence and reverse complement of sequence in one line Parameters $sSequence $dnaComplements
removeNonCodingProt() removeNonCodingProt(string $sSequence) : string Removes non-coding characters Parameters string $sSequence Throws \Exception Returns string